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running InterMine 1.8.5
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Find all genes on a chromosome
Lists the GO annotations for a given gene.
Returns disease terms for a given gene or list of genes.
Returns the RGD Pathway Terms for the given gene or list of genes.
Returns a list of QTL regions that overlap a given gene or genes
Returns the location for a given gene.
Find all genes that are associated with a particular GO term. This template will return genes that have been assigned the given GO term as well as genes that have a more specific GO term.
Find all genes that are associated with a particular Disease term. This template will return genes that have been assigned the given Disease term as well as genes that belong to subcategories of that disease.
Show the proteins for a particular gene.
Returns Mammalian Phenotype Terms for a give gene or list of genes
Returns the RGD Mammalian Phenotype Annotations to homologous genes.
Show the gene that codes for the following protein, with its chromosomal location and length.
Create a list of genes from RGD's Disease Ontology and a Chromosome.
Lists the GO biological process annotations for a given gene.
Find all genes that are annotated to a particular Disease ontology ID. This template will return genes that have been assigned the given Disease ID as well as genes that belong to subcategories of that disease.
Returns the RGD Disease Ontology Annotations to homologous genes.
Returns the genes annotated to the selected pathway
Returns the genes located with a particular QTL region
Returns the RGD Pathway Annotations to homologous genes.
Returns a list of all the objects in Ratmine that are associated with a given PubMed ID - Genes, Proteins, QTL, SNPs, etc.
Search for genes in a specified organism that is associated with a particular GO annotation.
Return a list of Proteins and Genes given a Protein Product weight range.
Returns a list of all genes for a organism
Returns a list of keywords for the given protein.
Find all genes that are associated with a particular Mammalian Phenotype (MP) term. This template will return genes that have been assigned the given MP term as well as genes that have a more specific MP term.
Returns description for a gene or a list of genes.
Returns a list of candidate genes for the provided QTL.
Find all genes that are associated with a particular Disease term and all child terms. This template will return genes that have been assigned the given Disease term as well as genes that belong to subcategories of that disease.
Returns a list of UniProt features for a given protein.
Returns the genes annotated to a given Pathway Ontology identifier.
Returns a list of gene products that have been found to exist as phosphoproteins (Source Uniprot Keywords).
Returns a list of all gene products which have been found to be glycosylated (Source Uniprot Keywords)
Returns a list of genes annotated to a given Pathway Ontology Term, and to its child pathways (if applicable)
Returns a list of Genes annotated to a particular ontology term
Find the GO identifier for a specific term.
Create a list of genes from the Mammalian Phenotype Ontology and a Chromosome.
For all genes, list the taxonIds available. Used by webservice to construct links to other intermines.
test if a specific gene is in mine
Returns a list of curated publications for a given author. Enter either the surname eg. Rapp, Smith, etc. or a combination of surname and initials, eg. Rapp JP.
For a given QTL, identified by its RGD ID, this returns a list of genes that fall within the QTL region.
Returns a list of QTLs for a given chromosome and list of QTLs.
Create a list of genes from a Pathway Ontology Term and a Chromosome.
Generate a list of genes from a gene ontology term and a chromosome.